BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021H09LP1|AL427833
(991 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1250 1889 0.0
>3x_Contig1250
Length = 5563
Score = 1889 bits (951), Expect = 0.0
Identities = 986/994 (99%), Gaps = 5/994 (0%)
Strand = Plus / Minus
Query: 1 agaatccctcttagatcgaaatatgm-agagattctgcctgtctaatatcggcatttgat 59
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1122 agaatccctcttagatcgaaatatgacagagattctgcctgtctaatatcggcatttgat 1063
Query: 60 catttttgtccatgggtttacaacc--aaattggtttattgaatcacaagttgttttaca 117
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 1062 catttttgtccatgggtttacaagcgcaaattggtttattgaatcacaagttgttttaca 1003
Query: 118 tgtttgtagtgctgttggaaatatcagtatggtggttcttacctctcatgatggaatatt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 tgtttgtagtgctgttggaaatatcagtatggtggttcttacctctcatgatggaatatt 943
Query: 178 ttgatgaattggaagactatttagagaatagaaagggtaaacattttggagattgccatt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 ttgatgaattggaagactatttagagaatagaaagggtaaacattttggagattgccatt 883
Query: 238 ttctaggagacgaagatctatgtttcgggttacatcatgatacattcaattttcttttac 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 ttctaggagacgaagatctatgtttcgggttacatcatgatacattcaattttcttttac 823
Query: 298 tgtgttgggttatattccaagccttttgggtactgtgtttgatagcagttcaaactgtac 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 tgtgttgggttatattccaagccttttgggtactgtgtttgatagcagttcaaactgtac 763
Query: 358 agatgttgaagggcgttacggattacgaatttgttcaaataaataagaagctaaaatcta 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 agatgttgaagggcgttacggattacgaatttgttcaaataaataagaagctaaaatcta 703
Query: 418 acggaactaccacggaagatatcttcagctcaaccccaccagaacttatgagtgaagaat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 acggaactaccacggaagatatcttcagctcaaccccaccagaacttatgagtgaagaat 643
Query: 478 tgattgcygagctagatgctcccgcattggatccaagacaagtacctcaaaggacgtgct 537
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tgattgctgagctagatgctcccgcattggatccaagacaagtacctcaaaggacgtgct 583
Query: 538 tcacagtttgctgtactttgctaggtcttgacaaattggtgacaatgataaaatcagtac 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tcacagtttgctgtactttgctaggtcttgacaaattggtgacaatgataaaatcagtac 523
Query: 598 tccgtctgaagtcagatgaaccttcttctcgttcatcccacctcagtgcactagcacgta 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tccgtctgaagtcagatgaaccttcttctcgttcatcccacctcagtgcactagcacgta 463
Query: 658 tccctaccgattacgggtggaagcagaatttgaaagatttctggctactacctgatactt 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tccctaccgattacgggtggaagcagaatttgaaagatttctggctactacctgatactt 403
Query: 718 catcaccattatggaggagaatattgctacctccaaaggacagtcatgcactattaaatg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 catcaccattatggaggagaatattgctacctccaaaggacagtcatgcactattaaatg 343
Query: 778 gaatggaagtggactattacactctatatacattaccaaatgctaccgaagagcttgtat 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gaatggaagtggactattacactctatatacattaccaaatgctaccgaagagcttgtat 283
Query: 838 gaatgaagacaatccattaccgtatatattgtacatatttgtatcctcatccatgccttg 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gaatgaagacaatccattaccgtatatattgtacatatttgtatcctcatccatgccttg 223
Query: 898 taagtagttgtcagaatgttgaatttgctattacccggaaatcgcgttaacatctcttcg 957
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 222 taagtagttgtcagaatgttgaatttgctattacccggaaatcgcgttaacatc-cttcg 164
Query: 958 agagat-cacaaagtatatttacatatcatgcga 990
|||||| |||||||||||||||||||||||||||
Sbjct: 163 agagatccacaaagtatatttacatatcatgcga 130
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7638
Number of Sequences: 1807
Number of extensions: 7638
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 991
length of database: 10,358,551
effective HSP length: 16
effective length of query: 975
effective length of database: 10,329,639
effective search space: 10071398025
effective search space used: 10071398025
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)